The detailed information of tRNA gene sequence


Sequence ID>PHG181004449
Genome IDKY963424
Search identical group
Phylum/ClassSiphoviridae
SpeciesShigella phage SSP1 (KY963424)
Start position on genome 104589
End posion on genome 104677
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttataaattc
tRNA gene sequence 
GGAAGAATAGCATAACGGTATTGCAGCAGATTGCTAATCTGTCGGTTTGAAATATAGCCT
TGTGGGTTCGATTCCCACTTCTTCCGCCA
Downstream region at tRNA end position 
gattttggtt
Secondary structure (Cloverleaf model)
>PHG181004449	Ser	GCT
                   c      GCCA gattttggtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     A - T          T T
                    T     C A C C C     A
        A A        A      | | | | |     G
      C     T A C G       G T G G G     C
      G       | | |                 T T
      G     T T G C
        T A        A     CGGTTTGAAATATAGCCTT
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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