The detailed information of tRNA gene sequence


Sequence ID>PHG181004452
Genome IDKY963424
Search identical group
Phylum/ClassSiphoviridae
SpeciesShigella phage SSP1 (KY963424)
Start position on genome 106909
End posion on genome 106983
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
aatagttaat
tRNA gene sequence
GCACCTATCGTCTAATGGTTAGGACATCAGGATTTCAATCTGAGAATCGGAGTTCAATTC
TCCGTGGGTGTACCA
Downstream region at tRNA end position
gtttctgcat
Secondary structure (Cloverleaf model)
>PHG181004452	Glu	TTC
                   t      ACCA gtttctgcat
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G C C T C     A
      T A A        C      | | | | |     A
    G       T C T G       C G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     GAAT
                    T - A
                    C - G
                    A - T
                    G - C
                    G + T
                  A       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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