The detailed information of tRNA gene sequence


Sequence ID>PHG181004642
Genome IDLN887844
Search identical group
Phylum/ClassMyoviridae
SpeciesPseudomonas phage VCM (LN887844)
Start position on genome 73016
End posion on genome 72927
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
tctaaattcc
tRNA gene sequence 
GGCGAGTTGGTAGAGTGGACGATTGCTCTAGTTTAGAAAACTAGCGAGTCAGAAATGGCT
CCGTGGGTTCGAATCCCACACTCGCCTCCA
Downstream region at tRNA end position 
atttggggat
Secondary structure (Cloverleaf model)
>PHG181004642	Ser	AGA
                   c      TCCA atttggggat
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A T G       G T G G G     C
    G       + | + |                 T T
    A       T T G C
      C G A        T     CGAGTCAGAAATGGCTCC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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