The detailed information of tRNA gene sequence


Sequence ID>PHG181005052
Genome IDMF158043
Search identical group
Phylum/ClassMyoviridae
SpeciesShigella phage Sf16 (MF158043)
Start position on genome 18500
End posion on genome 18589
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcttattagg
tRNA gene sequence 
GGTAGGTAGCGGCTAATGGAAGCCAAATAGTCTTGAAAACTATTGCCATTGTAGAGATAC
GGTGAGGGTTCGACTCCTTTATCTACCGCCt
Downstream region at tRNA end position 
aataagattt
Secondary structure (Cloverleaf model)
>PHG181005052	Ser	TGA
                   g      GCCt aataagattt
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G + T
                     T - A          T C
                    A     T T T C C     A
      A A T        G      + | + | |     G
    T       C G G C       G A G G G     C
    G       | | |                   T T
    G       G C C A
      A A          A     TGCCATTGTAGAGATACGGT
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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