The detailed information of tRNA gene sequence


Sequence ID>PHG181006370
Genome IDMF979564
Search identical group
Phylum/ClassSiphoviridae
SpeciesPectobacterium phage DU_PP_V (MF979564)
Start position on genome 28045
End posion on genome 27960
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggaaaataat
tRNA gene sequence 
CGCGAACTAGAGTTCTGGTGAACTCAGGGGGCTCATAACCCTCGGCGCTCTAGCCTAGGT
TGGTTCGATTCCAACGTTCGCTACCA
Downstream region at tRNA end position 
aattgcaagg
Secondary structure (Cloverleaf model)
>PHG181006370	Met	CAT
                   t      ACCA aattgcaagg
                     C   T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     C - G          T T
                    T     C A A C C     A
      T C T        A      | | | | |     G
    G       T G A G       G T T G G     C
    G       | | | |                 T T
    T       A C T C
      G A          A     GGCGCTCTAGCCTAG
                    G - C
                    G + T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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