The detailed information of tRNA gene sequence


Sequence ID>CHL1810000389
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 43845
End posion on genome 43915
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agttacttat
tRNA gene sequence 
GGCGGTATGGCCAAGCGGTAAGGCAGTGGATTGCAAATCCTCGACCCCCAGTTCGAATCT
GGGTGCCGCCTata
Downstream region at tRNA end position 
attttagaac
Secondary structure (Cloverleaf model)
>CHL1810000389	Cys	GCA
                   t      Tata attttagaac
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     G G G T C     A
        G A        G      | | | | |     G
      C     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GACC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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