The detailed information of tRNA gene sequence


Sequence ID>CHL1810000393
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 70824
End posion on genome 70897
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aaacagtttg
tRNA gene sequence 
GCGGGTGTAGCCAAGTGGTTAAGGCAGTGGGTTGTGGTTCCACCATTCGCCGGTTCAAGT
CCGGTCACTCGCCCtt
Downstream region at tRNA end position 
tctaaaatgt
Secondary structure (Cloverleaf model)
>CHL1810000393	His	GTG
                   g      CCtt tctaaaatgt
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G G C C     A
      T G A        A      + | | | |     A
    G       A C C G       G C C G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     CATTC
                    G - C
                    T - A
                    G - C
                    G - C
                    G + T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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