The detailed information of tRNA gene sequence


Sequence ID>CHL1810000395
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 110456
End posion on genome 110527
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
atcatgtgta
tRNA gene sequence 
GGGTTGCTAACTCAATGGTAGAGTACTCGGCTTTTAACCGAATAGTTCTGGGTTCGAGTC
CCAGGTAACCCAgta
Downstream region at tRNA end position 
ttgaatacgt
Secondary structure (Cloverleaf model)
>CHL1810000395	Lys	TTT
                   a      Agta ttgaatacgt
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G + T
                     C - G          T G
                    T     G A C C C     A
        A A        A      | | | | |     G
      T     C T C A       C T G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     TAGTT
                    C   A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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