The detailed information of tRNA gene sequence


Sequence ID>CHL1810000397
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 114631
End posion on genome 114712
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttgataataa
tRNA gene sequence 
GGGTCGGTGCCCGAGTGGTTAAAGGGGGCGGATTGTAAATCCGTTGCGTTTCGCTACGTT
GGTTCGAATCCAACTCGGCCCAata
Downstream region at tRNA end position 
cttgtttgca
Secondary structure (Cloverleaf model)
>CHL1810000397	Tyr	GTA
                   a      Aata cttgtttgca
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     G + T          T A
                    T     C A A C C     A
      T G A        G      | | | | |     G
    G       G C C C       G T T G G     C
    G         | | |                 T T
    T       A G G G
      T A A        G     TGCGTTTCGCTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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