The detailed information of tRNA gene sequence


Sequence ID>CHL1810000401
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 114411
End posion on genome 114339
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cccatattta
tRNA gene sequence 
GGGCCTATCGTCTAATGGATTAGGACAGAAACCTTCTAAGTTTCCAATGTAGGTTCGATT
CCTACTGGGCCTAtgc
Downstream region at tRNA end position 
aaaatcgaaa
Secondary structure (Cloverleaf model)
>CHL1810000401	Arg	TCT
                   a      Atgc aaaatcgaaa
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     C A T C C     A
      T A A        C      | | | | |     G
    G       T C T G       G T A G G     C
    G       + | | |                 T T
    A       G G A C
      T T A        A     CAAT
                    G - C
                    A - T
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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