The detailed information of tRNA gene sequence


Sequence ID>CHL1810000769
Genome IDAP018372
Search identical group
Phylum/ClassViridiplantae
SpeciesPrototheca stagnorum JCM 9641 (AP018372)
Start position on genome 11404
End posion on genome 11316
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttataaaagA
tRNA gene sequence 
GGAGAAATGACTGAGTGGTTGAAGGTAGCACATTGCTAATGTGCCATATGCAATAGCATA
TCAAGGGTTCGAAACCCTTTTTCTCCTTtt
Downstream region at tRNA end position 
ttataattag
Secondary structure (Cloverleaf model)
>CHL1810000769	Ser	GCT
                   A      TTtt ttataattag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          A A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G T C A       A A G G G     C
    G         + | |                 T T
    T       A G G T
      T G A        A     CATATGCAATAGCATATC
                    G - C
                    C - G
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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