The detailed information of tRNA gene sequence


Sequence ID>CHL1810000781
Genome IDAP018372
Search identical group
Phylum/ClassViridiplantae
SpeciesPrototheca stagnorum JCM 9641 (AP018372)
Start position on genome 8118
End posion on genome 8032
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atatattttt
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTTGAATGCGTCGGTTTTGAAAACCGAAATGGGGTAAAATCCA
TCAAGGGTTCGAAACCCTTTTTCTCCTaaa
Downstream region at tRNA end position 
tttttggaat
Secondary structure (Cloverleaf model)
>CHL1810000781	Ser	TGA
                   t      Taaa tttttggaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          A A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     AATGGGGTAAAATCCATC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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