The detailed information of tRNA gene sequence


Sequence ID>CHL1810000845
Genome IDDQ231548
Search identical group
Phylum/ClassViridiplantae
SpeciesBrassica rapa subsp. pekinensis (DQ231548)
Start position on genome 44001
End posion on genome 44089
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcctgatgtC
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGAAGGCGTAACATTGGAACTGTTATGTAGACTTTTGTTTA
CCGAGGGTTCGAATCCCTCTCTTTCCGTac
Downstream region at tRNA end position 
tttcaactaa
Secondary structure (Cloverleaf model)
>CHL1810000845	Ser	GGA
                   C      GTac tttcaactaa
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTAGACTTTTGTTTACC
                    T - A
                    A - T
                    A - T
                    C - G
                    A - T
                  T       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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