The detailed information of tRNA gene sequence


Sequence ID>CHL1810001027
Genome IDEU168190
Search identical group
Phylum/ClassStramenopiles
SpeciesHeterosigma akashiwo NIES 293 (EU168190)
Start position on genome 37015
End posion on genome 36929
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagccaaact
tRNA gene sequence 
GGAGAAATGGCTGAGTGGTCGAAAGCGATAGATTGCTAATCTATTGTACATTTTTTTGTA
CCGAGGGTTCGAATCCCTCTTTCTCTTagg
Downstream region at tRNA end position 
gaaggttttt
Secondary structure (Cloverleaf model)
>CHL1810001027	Ser	GCT
                   t      Tagg gaaggttttt
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACATTTTTTTGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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