The detailed information of tRNA gene sequence


Sequence ID>CHL1810001460
Genome IDEU912438
Search identical group
Phylum/ClassStramenopiles
SpeciesVaucheria litorea (EU912438)
Start position on genome 72924
End posion on genome 72997
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tatactatta
tRNA gene sequence 
CGGGACGTAGCGCAGCTTGGTAGCGCATCTGCTTTGGGAGCAGGGTGTCGCAGGTTCAAG
TCCTGCCGTCCCGAatt
Downstream region at tRNA end position 
aaatttaatt
Secondary structure (Cloverleaf model)
>CHL1810001460	Pro	TGG
                   a      Aatt aaatttaatt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C G A        A      | | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GTGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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