The detailed information of tRNA gene sequence


Sequence ID>CHL1810001883
Genome IDFJ858267
Search identical group
Phylum/ClassViridiplantae
SpeciesMicromonas commoda RCC299 (FJ858267)
Start position on genome 17903
End posion on genome 17975
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcatattaaa
tRNA gene sequence 
GCGTCCTTAGTTCAGTTGGTAGAACGCAGGTCTCCAAAACCTGATGTCGTAGGTTCGAGT
CCTACAGGGCGTGttt
Downstream region at tRNA end position 
aaatataaat
Secondary structure (Cloverleaf model)
>CHL1810001883	Trp	CCA
                   a      Gttt aaatataaat
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T T G       G T A G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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