The detailed information of tRNA gene sequence


Sequence ID>CHL1810002194
Genome IDGQ231541
Search identical group
Phylum/ClassStramenopiles
SpeciesAureococcus anophagefferens CCMP 1984 (GQ231541)
Start position on genome 7235
End posion on genome 7161
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
atcttgtatA
tRNA gene sequence 
GCTAGTGTAGCTCAGTTGGTAGAGCAGCTGATTTGTAATCAGCCGGTCGGGAGTTCAAGT
CTCTTCACTAGCTTtt
Downstream region at tRNA end position 
ttggagaatt
Secondary structure (Cloverleaf model)
>CHL1810002194	Thr	TGT
                   A      TTtt ttggagaatt
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C T C     A
      T G A        A      + + | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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