The detailed information of tRNA gene sequence


Sequence ID>CHL1810002195
Genome IDGQ231541
Search identical group
Phylum/ClassStramenopiles
SpeciesAureococcus anophagefferens CCMP 1984 (GQ231541)
Start position on genome 6549
End posion on genome 6463
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgaaaaaaat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGGTAGATTGCTAATCTATTGTACAGTATTCTGTA
CCGGGGGTTCGAATCCCCCTCTCTCCTgta
Downstream region at tRNA end position 
tattatcttt
Secondary structure (Cloverleaf model)
>CHL1810002195	Ser	GCT
                   t      Tgta tattatcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACAGTATTCTGTACC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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