The detailed information of tRNA gene sequence


Sequence ID>CHL1810002210
Genome IDGQ231542
Search identical group
Phylum/ClassStramenopiles
SpeciesAureoumbra lagunensis CCMP 1507 (GQ231542)
Start position on genome 89685
End posion on genome 89759
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aataattgtA
tRNA gene sequence 
GCTAGTGTAGCTCAGTCGGTAGAGCAGCTGATTTGTAATCAGCCGGTCGGGAGTTCAAGT
CTCTTCACTAGCTTta
Downstream region at tRNA end position 
aattataaat
Secondary structure (Cloverleaf model)
>CHL1810002210	Thr	TGT
                   A      TTta aattataaat
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C T C     A
      T G A        A      + + | | |     A
    C       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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