The detailed information of tRNA gene sequence


Sequence ID>CHL1810002569
Genome IDGU323224
Search identical group
Phylum/ClassStramenopiles
SpeciesThalassiosira oceanica CCMP1005 (GU323224)
Start position on genome 7199
End posion on genome 7273
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctattagtaT
tRNA gene sequence 
GCGTCCTTAGTTCAGTTGGTAGAACGCTAGTCTCCAAAATTAGATGTCGAGGGTTCAAGT
CCTTCAGGACGCGTtt
Downstream region at tRNA end position 
ctctttttaa
Secondary structure (Cloverleaf model)
>CHL1810002569	Trp	CCA
                   T      GTtt ctctttttaa
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    T - A
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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