The detailed information of tRNA gene sequence


Sequence ID>CHL1810003215
Genome IDHM222968
Search identical group
Phylum/ClassAlveolata
SpeciesChromerida sp. RM11 (HM222968)
Start position on genome 15880
End posion on genome 15793
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgggcgttgt
tRNA gene sequence 
GGAGAGATGGCGGAGGTGGTCGATCGTGTCTGACTTGAAATCAGAAGAACTTTAACAGGT
TCCGTGGGTTCGAATCCCACTCTCTCCTacc
Downstream region at tRNA end position 
atgattacat
Secondary structure (Cloverleaf model)
>CHL1810003215	Ser	TGA
                   t      Tacc atgattacat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T G G A        G      | | | | |     G
  G         G G C G       G T G G G     C
  G         + | | +                 T T
  T         T C G T
    C G A          G     AGAACTTTAACAGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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