The detailed information of tRNA gene sequence


Sequence ID>CHL1810003428
Genome IDHQ154129
Search identical group
Phylum/ClassViridiplantae
SpeciesPhyllostachys nigra var. henonis (HQ154129)
Start position on genome 12121
End posion on genome 12034
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attaggctgt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGATAGCTCCGGTCTTGAAAACCGGTATAGTTTTAGGAACT
ATCGAGGGTTCGAATCCCTCTCTCTCCTttt
Downstream region at tRNA end position 
gcttattgaa
Secondary structure (Cloverleaf model)
>CHL1810003428	Ser	TGA
                   t      Tttt gcttattgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G       + | | |                 T T
    T       T A G C
      T G A        T     TATAGTTTTAGGAACTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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