The detailed information of tRNA gene sequence


Sequence ID>CHL1810003603
Genome IDHQ325742
Search identical group
Phylum/ClassViridiplantae
SpeciesGossypium herbaceum subsp. africanum (HQ325742)
Start position on genome 47278
End posion on genome 47365
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taattatgta
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTCAAGGCGTAGCATTGGAACTGCTATGTAGACTCTTGTTTA
CCGAGGGTTCGAATCCCTCTCTTTCCGCac
Downstream region at tRNA end position 
cttcacctaa
Secondary structure (Cloverleaf model)
>CHL1810003603	Ser	GGA
                   a      GCac cttcacctaa
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T C A        G     TGTAGACTCTTGTTTACC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  T       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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