The detailed information of tRNA gene sequence


Sequence ID>CHL1810003620
Genome IDHQ325742
Search identical group
Phylum/ClassViridiplantae
SpeciesGossypium herbaceum subsp. africanum (HQ325742)
Start position on genome 38906
End posion on genome 38832
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcttttcat
tRNA gene sequence 
CGCGGGATAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCATGGGTTCAAA
TCCCGTTCCCGCAACat
Downstream region at tRNA end position 
tacatttttt
Secondary structure (Cloverleaf model)
>CHL1810003620	Met	CAT
                   t      ACat tacatttttt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T G C C C     A
      T G A        A      | + | | |     A
    T       C G A G       A T G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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