The detailed information of tRNA gene sequence


Sequence ID>CHL1810003624
Genome IDHQ325742
Search identical group
Phylum/ClassViridiplantae
SpeciesGossypium herbaceum subsp. africanum (HQ325742)
Start position on genome 8258
End posion on genome 8171
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttctcaatta
tRNA gene sequence 
GGAGAGATGGCTGAGTGGACTAAAGCGTCGGATTGCTAATCCGTTGTGCGAGTTATTCGT
ACCGAGGGTTCGAATCCCTCTCTTTCCGttt
Downstream region at tRNA end position 
cggtttttgg
Secondary structure (Cloverleaf model)
>CHL1810003624	Ser	GCT
                   a      Gttt cggtttttgg
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    A       A A G C
      C T A        G     TGTGCGAGTTATTCGTACC
                    T   T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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