The detailed information of tRNA gene sequence


Sequence ID>CHL1810005296
Genome IDJQ088178
Search identical group
Phylum/ClassStramenopiles
SpeciesUlnaria acus (JQ088178)
Start position on genome 22276
End posion on genome 22349
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattctatgg
tRNA gene sequence 
CGCGGAGTAGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCGAAGGTCAATGGTTCAAA
TCCATTCTCCGCTAtaa
Downstream region at tRNA end position 
acttagagaa
Secondary structure (Cloverleaf model)
>CHL1810005296	Met	CAT
                   g      Ataa acttagagaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T A C C     A
      C G A        A      | | | | |     A
    C       C G A G       A A T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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