The detailed information of tRNA gene sequence


Sequence ID>CHL1810005440
Genome IDJQ405663
Search identical group
Phylum/ClassStramenopiles
SpeciesSaccharina japonica (JQ405663)
Start position on genome 43453
End posion on genome 43368
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgaattttc
tRNA gene sequence 
GCATTTGTGGCCGAGTGGTTGAAGGCAACGGACTCATAATCCGTCTTCTTATTAGAACAC
CGCTGGTTCGAACCCAGCCAGATGCAaat
Downstream region at tRNA end position 
tacttagttc
Secondary structure (Cloverleaf model)
>CHL1810005440	Met	CAT
                   c      Aaat tacttagttc
                     G - C
                     C - G
                     A - T
                     T - A
                     T + G
                     T - A
                     G - C          C A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CTTCTTATTAGAACACC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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