The detailed information of tRNA gene sequence


Sequence ID>CHL1810005710
Genome IDJX280393
Search identical group
Phylum/ClassViridiplantae
SpeciesMagnolia macrophylla var. dealbata (JX280393)
Start position on genome 38222
End posion on genome 38130
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attgtctctc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGATAGCTCCGGTCTTGAAAACCGGTATAGTTCTGAACAAA
GAACTATCGAGGGTTCGAATCCCTCTCTCTCCTttt
Downstream region at tRNA end position 
gctcgttgaa
Secondary structure (Cloverleaf model)
>CHL1810005710	Ser	TGA
                   c      Tttt gctcgttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G       +   | |                 T T
    T       T A G C
      T G A        T     TATAGTTCTGAACAAAGAACTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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