The detailed information of tRNA gene sequence


Sequence ID>CHL1810006617
Genome IDJX827163
Search identical group
Phylum/ClassViridiplantae
SpeciesApopellia endiviifolia (JX827163)
Start position on genome 42062
End posion on genome 41973
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attttgttaA
tRNA gene sequence 
GGAGAAATGGCCGAGTGGATTATGGCGTCGGTCTTGAAAACCGATATAGTTCTTGAAACT
ATCGAGGGTTCGAATCCCTCCTTCTCCTTtt
Downstream region at tRNA end position 
ttttattcgt
Secondary structure (Cloverleaf model)
>CHL1810006617	Ser	TGA
                   A      TTtt ttttattcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A   C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G       + | | |                 T T
    A       T G G C
      T T A        G     TATAGTTCTTGAAACTATC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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