The detailed information of tRNA gene sequence


Sequence ID>CHL1810008352
Genome IDKC509523
Search identical group
Phylum/ClassStramenopiles
SpeciesDidymosphenia geminata BCC011 (KC509523)
Start position on genome 17744
End posion on genome 17833
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tattaatttA
tRNA gene sequence 
GGAGAAATGGCTGAGTGGTCGAAAGCAATAGATTGCTAATCTATCGTACAATTAATTGTA
CCCAGGGTTCGAATCCCTGTTTCTCCTGCa
Downstream region at tRNA end position 
tgaaaaatta
Secondary structure (Cloverleaf model)
>CHL1810008352	Ser	GCT
                   A      TGCa tgaaaaatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTACAATTAATTGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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