The detailed information of tRNA gene sequence


Sequence ID>CHL1810008375
Genome IDKC509524
Search identical group
Phylum/ClassStramenopiles
SpeciesLeptocylindrus danicus ccmp1856 (KC509524)
Start position on genome 13278
End posion on genome 13353
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattttgtcT
tRNA gene sequence 
CGCGGAGTAGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCGAAGGTCAATGGTTCAAA
TCCATTCTCCGCTAGaa
Downstream region at tRNA end position 
aatttattaa
Secondary structure (Cloverleaf model)
>CHL1810008375	Met	CAT
                   T      AGaa aatttattaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T A C C     A
      T G A        A      | | | | |     A
    C       C G A G       A A T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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