The detailed information of tRNA gene sequence


Sequence ID>CHL1810008658
Genome IDKC598087
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oculata CCMP525 (KC598087)
Start position on genome 97481
End posion on genome 97394
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatgatctta
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGTCTGACTTGAAATCAGAAGAACTAGGAATGGTT
CCGTGGGTTCGAATCCCACTCTCTCTTCtc
Downstream region at tRNA end position 
aatattttta
Secondary structure (Cloverleaf model)
>CHL1810008658	Ser	TGA
                   a      TCtc aatattttta
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     AGAACTAGGAATGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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