The detailed information of tRNA gene sequence


Sequence ID>CHL1810008689
Genome IDKC598089
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis limnetica CCMP505 (KC598089)
Start position on genome 6568
End posion on genome 6641
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttaaaaaca
tRNA gene sequence 
GCGTCTTTAGTTCAGTTGGTAGAACGTAGGTCTCCAAAACCTAATGCCGAGGGTTCAAGT
CCTTCAAGGCGTGCtt
Downstream region at tRNA end position 
catattttag
Secondary structure (Cloverleaf model)
>CHL1810008689	Trp	CCA
                   a      GCtt catattttag
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     T - A
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGCC
                    T - A
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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