The detailed information of tRNA gene sequence


Sequence ID>CHL1810008707
Genome IDKC598089
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis limnetica CCMP505 (KC598089)
Start position on genome 97798
End posion on genome 97711
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
catgatctta
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGTCTGACTTGAAATCAGAAGAACTAGGAATGGTT
CCGTGGGTTCGAATCCCACTCTCTCTTCtc
Downstream region at tRNA end position 
aatattttta
Secondary structure (Cloverleaf model)
>CHL1810008707	Ser	TGA
                   a      TCtc aatattttta
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     AGAACTAGGAATGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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