The detailed information of tRNA gene sequence


Sequence ID>CHL1810011269
Genome IDKJ000048
Search identical group
Phylum/ClassViridiplantae
SpeciesEchinochloa oryzicola STB03 (KJ000048)
Start position on genome 65597
End posion on genome 65524
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgttttgaaa
tRNA gene sequence 
GCGCTCTTAGTTCAGTTTGGTAGAACGCGGGTCTCCAAAACCCGATGTCGTAGGTTCAAA
TCCTACAGAGCGTGatt
Downstream region at tRNA end position 
ccatatatct
Secondary structure (Cloverleaf model)
>CHL1810011269	Trp	CCA
                   a      Gatt ccatatatct
                     G + T
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T T G       G T A G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        G     ATGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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