The detailed information of tRNA gene sequence


Sequence ID>CHL1810011275
Genome IDKJ000048
Search identical group
Phylum/ClassViridiplantae
SpeciesEchinochloa oryzicola STB03 (KJ000048)
Start position on genome 7436
End posion on genome 7347
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tttggaacga
tRNA gene sequence
GGAGAGATGGCTGAGTGGACTAAAGCGGCGGATTGCTAATCCGTTGTACAATTTTTTTGT
ACCGAGGGTTCGAATCCCTCTCTTTCCGCCc
Downstream region at tRNA end position
cctcggatca
Secondary structure (Cloverleaf model)
>CHL1810011275	Ser	GCT
                   a      GCCc cctcggatca
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    A       A A G C
      C T A        G     TGTACAATTTTTTTGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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