The detailed information of tRNA gene sequence


Sequence ID>CHL1810024858
Genome IDKU214867
Search identical group
Phylum/ClassViridiplantae
SpeciesSaccharum hybrid cultivar (KU214867)
Start position on genome 12097
End posion on genome 12010
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attgggctgt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGATAGCTCCGGTCTTGAAAACCGGTATAGTTCTAGGAACT
ATCGAGGGTTCGAATCCCTCTCTCTCCTttt
Downstream region at tRNA end position 
gtatattgaa
Secondary structure (Cloverleaf model)
>CHL1810024858	Ser	TGA
                   t      Tttt gtatattgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G       + | | |                 T T
    T       T A G C
      T G A        T     TATAGTTCTAGGAACTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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