The detailed information of tRNA gene sequence


Sequence ID>CHL1810027343
Genome IDKU724133
Search identical group
Phylum/ClassViridiplantae
SpeciesHaplostachys haplostachya HI0333 (KU724133)
Start position on genome 8177
End posion on genome 8090
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttcaattg
tRNA gene sequence 
GGAGAGATGGCTGAGTGGACTAAAGCGTCGGATTGCTAATCCGTTGTACGAGTTATTCGT
ACCGAGGGTTCGAATCCCTCTCTTTCCGttt
Downstream region at tRNA end position 
ccggtgatga
Secondary structure (Cloverleaf model)
>CHL1810027343	Ser	GCT
                   g      Gttt ccggtgatga
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    A       A A G C
      C T A        G     TGTACGAGTTATTCGTACC
                    T   T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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