The detailed information of tRNA gene sequence


Sequence ID>CHL1810048330
Genome IDLC375846
Search identical group
Phylum/ClassViridiplantae
SpeciesSisymbrium irio J04 (LC375846)
Start position on genome 35260
End posion on genome 35168
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attatctttc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGATGGCTCCGGTCTTGAAAACCGGTATAGTTCATAAAAAA
TAACTATCGAGGGTTCGAATCCCTCTCTCTCCTttt
Downstream region at tRNA end position 
gttggatgaa
Secondary structure (Cloverleaf model)
>CHL1810048330	Ser	TGA
                   c      Tttt gttggatgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G       + | | |                 T T
    T       T G G C
      T G A        T     TATAGTTCATAAAAAATAACTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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