The detailed information of tRNA gene sequence


Sequence ID>CHL1830000437
Genome IDKC509523
Search identical group
Phylum/ClassStramenopiles
SpeciesDidymosphenia geminata BCC011 (KC509523)
Start position on genome 12199
End posion on genome 12126
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctcgtttttt
tRNA gene sequence 
GCCCCCATCGTCTAGAGGCCTAGGACAACTCCCTTTCACGGAGTAGACAGGGATTCGAAT
TCCCTTGGGGGTACta
Downstream region at tRNA end position 
tctatctctt
Secondary structure (Cloverleaf model)
>CHL1830000437	Glu	TTC
                   t      ACta tctatctctt
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C T     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G A     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGAC
                    A - T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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