The detailed information of tRNA gene sequence


Sequence ID>CHL1861000031
Genome IDAP010820
Search identical group
Phylum/ClassViridiplantae
SpeciesKeteleeria davidiana (AP010820)
Start position on genome 107173
End posion on genome 106767
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tctccgagaa
tRNA gene sequence 
GGGGATATGGCGGAATTGGTAGACGCTACGGACTTGATATCCGTTGGCTTTATAGACCGT
GAGGGTTCAAGTCCCTCTATCCCCAccc
Downstream region at tRNA end position 
aggttcactc
Secondary structure (Cloverleaf model)
>CHL1861000031	Ser	TGA
                   a      Accc aggttcactc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGGCTTTATAGACCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T G A
intron: position=38, length=322 (in A-loop)
CGAATTGAGCCTTGGTATGGAAACCTACCAAGTGATAGCTTCCAAATCCAGGGAACCCTGGGATATTTTG
AATGGGTAATCCTGAGCCAAATCCGGTTCATAGAGACAATGGTTTCTTTCCTAGGATAGGAAGGGGATAG
GTGCAGAGACTCAATGGAAGCTATTCTAACGAATGAATCTCATTTGGGGTCCAGTACTCTTCTACTCTAG
ATAGGGAGTTAAATCAGTTTTTGGAATAAATGAAATGATTGGACGAGGATAAAGATAGAGTCCAATTCTA
CGTGTCAATGTCAACAACAATGCAAATTGCAGTAGGAGGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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