The detailed information of tRNA gene sequence


Sequence ID>CHL1861000687
Genome IDKC012944
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis gaditana 3B (KC012944)
Start position on genome 37061
End posion on genome 37335
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttttagctaa
tRNA gene sequence 
GGGGGCGTGGTGGAATGGTAGACACAACGGACTTAAAATCCGTTGACTATTACAGTCGTG
GGGGTTCAAGTCCCCCCGCCCCCAttt
Downstream region at tRNA end position 
attaaaaaca
Secondary structure (Cloverleaf model)
>CHL1861000687	Leu	TAA
                   a      Attt attaaaaaca
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    G       G G T G       G G G G G     C
    G         | | |                 T T
    T       A C A C
      A G          A     TGACTATTACAGTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=191 (in A-loop)
TTTTGAGCATTAATTTGTAAGTTCTCAAATTCAGAAAAAGTCTTTCCTGATAGCTGGATAGAACAATTCT
GAGCCAACTCATAAAAATGAAAAGGTGCAGAGACTCAATGGGAACTACCCGCAAGGTAAAGATAGAGTCC
ATACTTAAAGTAGAAAATAATCACTAAATTGATATTTTTACAAAGTAGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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