The detailed information of tRNA gene sequence


Sequence ID>CHL1861001993
Genome IDKT315754
Search identical group
Phylum/ClassViridiplantae
SpeciesCupressus gigantea (KT315754)
Start position on genome 75053
End posion on genome 74682
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tctacaagaa
tRNA gene sequence 
GGGGATATGGCGGAATCGGTAGACGCTACGGACTTAAAATCCGTTGGTTTTATAGATCGT
GAGGGTTCGAGTCCCTCTATCCCCAggt
Downstream region at tRNA end position 
tatctgtttt
Secondary structure (Cloverleaf model)
>CHL1861001993	Leu	TAA
                   a      Aggt tatctgtttt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    C       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGGTTTTATAGATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=287 (in A-loop)
TTTTTTGAGCCTTGGTATGGAAACTTACCAAGTGATAGCATCCAAATCCAGGGAACCCTGGGATATTTTG
AATGGGCAATCCTGAGCCAAATCCGATTTCTAGAGACAATAGTTTCCTTTCCGAGAACGGGATAGGTGCA
GAGACTCAACGGAAGCTATTCTAACAAATAAACATAATTTGGATTGGATACAATCCATTTTTGGAAGTAA
TAATTGTACGAGGATAAAGATAGAGCCCAATTCTACATGTCAATGTCAACAACAATGAAAATTGGAGTAG
GAGGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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