The detailed information of tRNA gene sequence


Sequence ID>CHL1861003197
Genome IDKX342847
Search identical group
Phylum/ClassViridiplantae
SpeciesSinalliaria limprichtiana var. grandifolia (KX342847)
Start position on genome 46518
End posion on genome 46914
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aagcaaaaag
tRNA gene sequence 
GGGGATATGGCGGAATTGGTAGACGCTACGGACTTAATATCCGTTGACTTTTAAAATCGT
GAGGGTTCAAGTCCCTCTATCCCCAacc
Downstream region at tRNA end position 
ctactcccca
Secondary structure (Cloverleaf model)
>CHL1861003197	Leu	TAA
                   g      Aacc ctactcccca
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGACTTTTAAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T A A
intron: position=38, length=312 (in A-loop)
TGGATTGAGCCTTGGTATGGAAACCTACTAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAATTAACA
ATGGGCAATCCTGAGCCAAATCCTGGGTTACGCGAACAAACCAGAGTTTAGAAAGCGGGATAGGTGCAGA
GACTCAATGGAAGCTGTTCTAACAAATGGAGTTCACTACCTTGTGTTGATCAAATGATTCACTTCATAGT
CTGATAGATCCTTGGTGGAACTTATTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATA
CTGACAACAATGAAATTTATAGTAAGATGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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