The detailed information of tRNA gene sequence


Sequence ID>CHL1861004973
Genome IDLC361351
Search identical group
Phylum/ClassViridiplantae
SpeciesArabis flagellosa Kifune (LC361351)
Start position on genome 46325
End posion on genome 46730
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aagcaaaaaa
tRNA gene sequence 
GGGGATATGGCGGAATTGGTAGACGCTACGGACTTAATATCCGTTGACTTTTAAAATCGT
GAGGGTTCAAGTCCCTCTATCCCCAact
Downstream region at tRNA end position 
ctactacccc
Secondary structure (Cloverleaf model)
>CHL1861004973	Leu	TAA
                   a      Aact ctactacccc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGACTTTTAAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T A A
intron: position=38, length=321 (in A-loop)
TGGATTGAGCCTTGGTATGGAAACCTACTAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAATTAACA
ATGGGCAATCCTGAGCCAAATCCTGGTTTACGCGAACAAACCTGAGTTTCAAAAGCGAGAAAAGAGGGAT
AGGTGCAGAGACTCAATGGAAGCTGTTCTAACAAATGGAGTTCACTACCTTGTATTGATCAATAGATTCA
CTTCATAGTCTGATAGATCCTTGGTGGAACTTATTAATCGGACGAGAATAAAGATAGAGTCCCATTCTAC
ATGTCAATACTGACAACAATGAAATTTATAGTAAGATGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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