The detailed information of tRNA gene sequence


Sequence ID>CHL1861005308
Genome IDMF276982
Search identical group
Phylum/ClassViridiplantae
SpeciesPseudopediastrum boryanum (MF276982)
Start position on genome 59282
End posion on genome 59608
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaataattat
tRNA gene sequence 
GGGGATATGGCGGAATGGTAGACGCTACGGACTTAAAATCCGTTGATCTTTGCGATCGTG
AGGGTTCAAGTCCCTCTATCCCCAata
Downstream region at tRNA end position 
aaagatagtt
Secondary structure (Cloverleaf model)
>CHL1861005308	Leu	TAA
                   t      Aata aaagatagtt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGATCTTTGCGATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=243 (in A-loop)
AATATTCAATTTTTGAGCCTTTTTAAAAAATTTTAAAAAGTGAAAGCTTTCAAAATCAGAAAAACTTTTT
GTTAAAAAAAATAATGTCTCTATAAAAACAAAAAGCAATACTGAGCCAATAGATAAGACTTAAAAATTTT
TTTTTGTTTTATTTTAGGTGCAGAGACTCAATGAAAGCTATTTTTTAGTAAAAGATAAAGATAGAGTCCA
AAAAAACGTTTAACAAGTTTAAATAAATAGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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