The detailed information of tRNA gene sequence


Sequence ID>CHL1899104517
Genome IDKR296789
Search identical group
Phylum/ClassViridiplantae
SpeciesAstragalus mongholicus var. nakaianus (KR296789)
Start position on genome 98724
End posion on genome 99598
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttggctcggg
tRNA gene sequence 
GGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCATGGCGGATGTCAGCGGTTCGAGT
CCGCTTATCTCCAact
Downstream region at tRNA end position 
cgtgaactta
Secondary structure (Cloverleaf model)
>CHL1899104517	Ala	TGC
                   g      Aact cgtgaactta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     ATGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       T
                  T       A *
                    T G C
intron: position=38, length=802 (in A-loop)
ATTGGGTCGTTGCGATTACGGGTTGGATGTCTAATTGTGCAGGCGGTAATGATAGTATCTTGTACCTGAA
CCGGTGGCTCACTTTTTCTAAGTAATGGGAAAGAGGACCGAAACATGCCACTGAAAGACTCTACTGAGAC
AAAGATGGGCTGTCAAGAACGTAGAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACAT
GGACGGTAGTTGGAGTCGGTGGCTCTCCTAGGGTTTCCTCATCTGAGATCCTGGGGAAGAGGATCAAGCT
GGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGGAAAACAAAAGGA
AAGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTT
CGGCATCCAGGGGTCGCGGACCGACCATAGAACCCTGTTCTAAAAGCGGAACGGATTAGTTATCCGCTCT
CAGGTTGAATTGAACAGTTAAGGGTCGGAGAAGTGCAATTACTCATTCTTAAAACCTGCACCAAAGAGTC
GGGCGGAAAAAGGGGGGGAGAAGCTCTTCGTTCCCGGTTCTCCTGTAGCTGGATCCTCCGGAACAACAAG
AATCCTTAGTTAGAATGGGATTCCAACTCAGCACCTTTTGATATTTTGAGAAGAGTTGCTCTTTGGAGAG
CACAGTACGATGAAAGTTGTCAGCTGTGTTCGGGGGGTTATTGTCTATCGTTGGCCTCTATGGTAGAATC
AGTTGGGGCCTGAGAGGCGGTGATTTACCCTG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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