The detailed information of tRNA gene sequence


Sequence ID>CHL1899108094
Genome IDKX290855
Search identical group
Phylum/ClassViridiplantae
SpeciesPassiflora edulis (KX290855)
Start position on genome 136204
End posion on genome 135176
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cccgcacgaT
tRNA gene sequence 
GGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATACGGGCGAGGTCTCTGGTTCAAGTC
CAGGATGGCCCAGCt
Downstream region at tRNA end position 
gcgccaaaga
Secondary structure (Cloverleaf model)
>CHL1899108094	Ile	GAT
                   T      AGCt gcgccaaaga
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T G
                    T     G G A C C     A
        G A        A      + | | | |     A
      T     C T C G       T C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A *
                    G A T
intron: position=38, length=954 (in A-loop)
ATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGTCACATGGATAGTTCAATGTGCTCATCAGCGCCT
GACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTATTTCTCCTGTTCGAACCGGGGTTTGAA
ACCAAACTTCTCCTCAGGAGGATAGATGGGGTGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATT
CACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCACGGCTCCTCTCTTCTCGAGAATCCATACATCCC
TTATCAGTGTATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATCAAATGGA
GCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGCGACGGAGGG
ATCGTACCATTCGAGCCTTTTTTTTTCATGCCTTTCCCGGAGGTCTGGAGAAAGCAGCAATCAATAGGAT
TTTCCTAACTCTCCCTTCCCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCCGCAGGGACCAGGAGATT
GGATCTAGCCGTAAGAAGAATGCTTGGCTGATAAATAACTCACTTCTTGGTCTTCGACCCCCTCAGTCAC
TACGAACGCCCCCGATCGGTGCAATGGGATGTGTCTATTTCTCTATCTCTTAACTCGAAATGGGAGCAGG
TTTGAAAAAGGATCTTAGAGTGTCTAAGGTGGGGCCAGGAGGGTCTCGTCTCTTAACACCTTCTCTTTTC
TTCTTATCGGAGTTATTTCAAAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGA
GCGCAGTACAACGGAAAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGA
TTCTCTCCCAATTGGTTGCACCGGGGGTGCGAGGATTTACTTCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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