The detailed information of tRNA gene sequence


Sequence ID>CHL1899109234
Genome IDKX831887
Search identical group
Phylum/ClassViridiplantae
SpeciesMedicago falcata 1210 (KX831887)
Start position on genome 24513
End posion on genome 23628
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cttggctcgg
tRNA gene sequence 
GGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCATGGCGGATGTCAGCGGTTCGAGT
CCGCTTATCTCCAact
Downstream region at tRNA end position 
cgtgaattta
Secondary structure (Cloverleaf model)
>CHL1899109234	Ala	TGC
                   g      Aact cgtgaattta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     ATGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       T
                  T       A *
                    T G C
intron: position=38, length=813 (in A-loop)
ATTGGGTCGTTGCGATTACGGGTTGGATGTCTAATTGTACAGGCGGTAATGATAGTATCTTGTACCTGAA
CCGGTGGCTCACTTTTTCTAAGTAATGGGAAAGAGGACCGAAACATGCCACTGAAAGACTCTACTAAGAC
AAAGATGGGCTGTCAAAAACGTAGAGGAGGTAGGATGGGCGGTTGGTCAGATCTAGTATGGATCGTACAT
GGACGGTAGTTGGAGTCGGTGGCTCTCCTAGGGTTTCCTCATCTGAGATCCTGGGGAAGAGGATTAAGCT
GGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGGAAAATAAAAGGA
AAGAAAATCCATGGACCGACCCCCTCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTT
CGGCATCCAGGGGTCGCGGACCGACCATAGAATCCTGTTCAAAAAAAAGCGGAACGCATTAGTTATCCGC
TCTCAGGTTGAACAGTTAAGGGTCGGAGAAGTGCAATTACTCATTCTTAACTTAAAACCCACATTCTTAA
GAGCAAAGAGTCGGGCGGAAAAAGGGAAGAGAAGCTCTTCGTTCCCGGTTCTCCTGTAGCTGGATCCTCT
GGAACCACTAGAATCCTAAGTTTGAATGGGATTCCAACTCAGAACCTTTTGATATTTTGAGAAGAGTTGC
TCTTTGGAGAGCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGAGGGTTATTGTCTATCGTTGGCCTCT
ATGGTAGAATCCGTTGGGGCCTGAGAGGCGGTGATTTACCCTG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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