The detailed information of tRNA gene sequence


Sequence ID>CHL1899111650
Genome IDKY820583
Search identical group
Phylum/ClassViridiplantae
SpeciesPassiflora cincinnata UFV (KY820583)
Start position on genome 101510
End posion on genome 102538
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cccgcacgaT
tRNA gene sequence 
GGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATACGGGCGAGGTCTCTGGTTCAAGTC
CAGGATGGCCCAGCt
Downstream region at tRNA end position 
gcgccaaaga
Secondary structure (Cloverleaf model)
>CHL1899111650	Ile	GAT
                   T      AGCt gcgccaaaga
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T G
                    T     G G A C C     A
        G A        A      + | | | |     A
      T     C T C G       T C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A *
                    G A T
intron: position=38, length=954 (in A-loop)
ATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGTCACATGGATAGTTCAATGTGCTCATCAGCGCCT
GACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAA
ACCAAACTTCTCCTCAGGAGGATAGATGGGGTGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATT
CACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCACGGCTCCTCTCTTCTCGAGAATCCATACATCCC
TTATCAGTGTATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATCAAATGGA
GCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGCGACGGAGGG
ATCGTACCATTCGAGCCTTTTTTTTTCATGCCTTTCCCGGAGGTCTGGAGAAAGCAGCAATCAATAGGAT
TTTCCTAACTCTCCCTTCCCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCCGCAGGGACCAGGAGATT
GGATCTAGCCGTAAGAAGAATGCTTGGCTGATAAATAACTCACTTCTTGGTCTTCGACCCCCTCAGTCAC
TACGAACGCCCCCGATCGGTGCAATGGGATGTGTCTATTTCTCTATCTCTTAACTCGAAATGGGAGCAGG
TTTGAAAAAGGATCTTAGAGTGTCTAAGGTGGGGCCAGGAGGGTCTCGTCTCTTAACACCTTCTCTTTTC
TTCTTATCGGAGTTATTTCAAAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGA
GCGCAGTACAACGGAAAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGA
TTCTCTCCCAATTGGTTGCACCGGGGGTGCGAGGATTTACTTCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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